Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3826

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3825: 12193 - K02941 RP-LP0, RPLP0 large subunit ribosomal protein LP0, at 671427 to 672513 12193 mRNA_3826: 12194 - Hypothetical Protein, at 673112 to 675577 12194

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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672,954 - -0.6
672,954 - 0.1
672,968 - -0.8
672,968 - -0.7
672,968 + -0.1
672,971 - -0.2
672,975 + 0.8
672,978 + -0.0
672,982 + -1.3
672,985 + -1.4
672,986 - 2.1
672,986 - 1.0
672,990 + -0.7
672,993 - -0.5
672,995 + -0.8
673,008 + -0.5
673,009 + 0.1
673,010 + 0.0
673,011 + -0.4
673,021 + 1.2
673,022 + -0.4
673,062 + 0.1
673,178 - 1.2
673,187 - -0.2
673,320 + 0.2
673,486 + 12194 mRNA_3826 0.15 0.7
673,645 + 12194 mRNA_3826 0.22 0.1
673,656 + 12194 mRNA_3826 0.22 1.2
674,191 + 12194 mRNA_3826 0.44 0.2
674,405 + 12194 mRNA_3826 0.52 -0.5
675,218 - 12194 mRNA_3826 0.85 -1.2
675,331 + -0.6
675,498 + -0.6
675,513 + -1.0
675,517 + 0.3
675,527 - 0.3
675,553 + -0.3
675,614 - -0.7
675,617 - -0.2
675,633 - -0.0
675,647 - 0.1
675,648 + -0.4
675,651 - -0.3
675,656 - 0.4
675,663 + -0.4
675,667 - -0.0
675,673 - 0.2
675,681 - -1.2
675,683 + 0.2
675,690 - 0.7
675,693 - 0.8
675,694 - -0.5
675,695 + -0.9
675,696 - -0.1
675,696 + 1.1
675,697 - -0.2
675,703 + -0.6
675,703 + 0.2
675,706 + 0.3
675,711 - 0.3
675,713 - 0.1
675,838 - -0.2
675,856 - -0.6
675,862 - -0.8
675,862 - 0.6
675,863 - -0.8
675,863 - 0.1
675,865 + 0.2
675,868 - 0.0
675,870 + -0.6
675,872 + -0.1
675,875 - -0.1
675,885 - -0.3
675,886 + -1.1
675,891 + -0.3
675,901 + -1.1
675,904 + -0.2
675,905 + -0.1
675,979 + -0.1
675,993 - 0.7
676,015 + -0.2
676,035 - -0.1
676,076 + 0.5
676,156 + 1.5
676,183 + -1.0
676,187 + 0.3
676,484 + 0.0