Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3743

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3742: 12110 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 474492 to 476469 12110 mRNA_3743: 12111 - K15289 SLC35F5 solute carrier family 35, member F5, at 476780 to 478513 12111

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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475,797 - 12110 mRNA_3742 0.66 1.6
476,274 + -1.1
476,501 - 0.3
476,545 + 2.1
476,550 + -2.6
476,724 - -0.0
477,006 + 12111 mRNA_3743 0.13 -1.1
477,010 + 12111 mRNA_3743 0.13 -0.1
477,031 + 12111 mRNA_3743 0.14 0.7
477,693 + 12111 mRNA_3743 0.53 0.3
477,860 - 12111 mRNA_3743 0.62 0.1
477,875 - 12111 mRNA_3743 0.63 0.1
477,889 + 12111 mRNA_3743 0.64 0.6
478,181 - 12111 mRNA_3743 0.81 -0.2
478,309 - 12111 mRNA_3743 0.88 -1.1
478,312 + 12111 mRNA_3743 0.88 1.1
478,324 + 12111 mRNA_3743 0.89 0.1
478,589 + -0.3
478,592 + -0.2
478,594 - -1.4
478,603 + 0.3
478,606 - -0.4
478,645 - 0.0
478,764 - 0.2
478,764 + 0.6
478,772 + 0.1
478,772 + -0.5
478,785 - 0.4
478,882 - -0.1
478,899 - 1.4
478,899 - -0.5
478,899 - -0.3
478,899 - 0.1
478,904 + 0.4
478,908 + -1.1
478,908 + 0.4
478,935 + 0.1
478,943 + -0.1
479,380 + -0.3
479,504 + -0.5
479,511 + -0.5