Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3699

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3698: 12066 - K10428 DCTN6 dynactin 6, at 385583 to 386475 12066 mRNA_3699: 12067 - KOG0870 DNA polymerase epsilon, subunit D, at 386627 to 387665 12067 mRNA_3700: 12068 - K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2, at 387944 to 388740 12068

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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386,745 - 12067 mRNA_3699 0.11 -0.6
386,843 + 12067 mRNA_3699 0.21 0.3
387,133 - 12067 mRNA_3699 0.49 -0.5
387,134 - 12067 mRNA_3699 0.49 1.4
387,261 - 12067 mRNA_3699 0.61 -0.7
387,713 + 2.0
387,745 - 1.0
387,876 + -0.3
388,030 + 12068 mRNA_3700 0.11 -0.1
388,030 - 12068 mRNA_3700 0.11 -0.4