Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3665

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3664: 12032 - K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26, at 290844 to 292094 12032 mRNA_3665: 12033 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083, at 292200 to 295663 12033

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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291,888 - 12032 mRNA_3664 0.83 -0.5
292,165 - -0.8
292,166 + 0.7
292,187 - 0.6
292,192 - 0.5
292,324 + -0.1
292,326 - 1.1
292,451 - 0.1
292,488 + -0.2
292,612 - 12033 mRNA_3665 0.12 0.4
292,756 + 12033 mRNA_3665 0.16 -0.0
292,888 + 12033 mRNA_3665 0.20 -1.8
292,932 + 12033 mRNA_3665 0.21 1.1
293,056 - 12033 mRNA_3665 0.25 0.7
293,470 - 12033 mRNA_3665 0.37 0.1
293,492 - 12033 mRNA_3665 0.37 0.8
293,574 - 12033 mRNA_3665 0.40 -0.3
293,642 + 12033 mRNA_3665 0.42 -0.1
293,799 + 12033 mRNA_3665 0.46 -0.5
294,359 + 12033 mRNA_3665 0.62 1.5
294,646 - 12033 mRNA_3665 0.71 0.3
294,951 + 12033 mRNA_3665 0.79 0.1
295,234 - 12033 mRNA_3665 0.88 0.0
295,271 - 12033 mRNA_3665 0.89 -0.9
295,583 + 1.0
295,671 + -1.9
295,672 - 1.0
295,711 - -0.5
295,715 - 0.4
295,801 + -0.5
295,802 - 0.1
295,803 + 0.4
295,806 - 0.1
295,818 - 0.9
295,823 + -0.3
295,825 - -0.3
295,829 - 0.5
295,830 - 0.6
295,850 + 0.2
295,853 - -0.5
295,861 - -0.3
295,866 + -1.0
295,974 - -1.2
295,977 - -0.2
295,980 - -0.2
295,990 - 0.2
295,997 - -1.5
295,999 - -0.9
296,001 - -0.8
296,004 - 0.2
296,011 + 1.6
296,012 - 0.2
296,025 + 0.4
296,137 - 0.5
296,144 + -0.7
296,148 - 1.1
296,166 - 1.0
296,173 + 0.4
296,297 - -1.5
296,316 + -0.2
296,319 + -0.5
296,431 - 1.1
296,610 - -0.3
296,612 - 0.9
296,626 + 0.7