Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3629

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3628: 11996 - K10849 ERCC1 DNA excision repair protein ERCC-1, at 202614 to 203898 11996 mRNA_3629: 11997 - Hypothetical Protein, at 203983 to 204971 11997 mRNA_3630: 11998 - Hypothetical Protein, at 205632 to 206590 11998

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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202,998 + 11996 mRNA_3628 0.30 0.2
203,138 - 11996 mRNA_3628 0.41 -0.1
203,147 - 11996 mRNA_3628 0.41 -0.4
203,267 + 11996 mRNA_3628 0.51 -0.6
203,724 - 11996 mRNA_3628 0.86 -0.6
203,731 - 11996 mRNA_3628 0.87 -0.6
203,861 + 1.3
204,192 + 11997 mRNA_3629 0.21 -0.9
204,585 - 11997 mRNA_3629 0.61 -0.5
204,704 - 11997 mRNA_3629 0.73 -0.1
205,132 - -0.5
205,140 + 1.0
205,281 - 1.0
205,282 + 0.0
205,456 - -0.8
205,841 + 11998 mRNA_3630 0.22 0.9