Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3614

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3613: 11981 - K09518 DNAJB12 DnaJ homolog subfamily B member 12, at 166931 to 168714 11981 mRNA_3614: 11982 - K00844 HK hexokinase, at 168921 to 171273 11982 mRNA_3615: 11983 - KOG3223 Uncharacterized conserved protein, at 171403 to 172846 11983

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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168,274 - 11981 mRNA_3613 0.75 -0.5
168,424 - 11981 mRNA_3613 0.84 0.1
168,437 - 11981 mRNA_3613 0.84 0.3
168,585 - 0.4
168,691 - -0.3
169,020 + 0.6
169,450 + 11982 mRNA_3614 0.22 0.5
169,695 - 11982 mRNA_3614 0.33 0.3
169,896 - 11982 mRNA_3614 0.41 -0.7
169,962 - 11982 mRNA_3614 0.44 0.2
170,577 - 11982 mRNA_3614 0.70 -0.2
170,614 + 11982 mRNA_3614 0.72 0.3
170,899 - 11982 mRNA_3614 0.84 -0.7
171,185 + -1.7
171,194 + 0.3
171,197 - 0.2
171,205 + -0.2
171,238 + -0.4
171,347 + -0.3
171,348 - 0.1
171,350 + 1.0