Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3594

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125373 to 127423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127609 to 129068 11962 mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129467 to 131137 11963

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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127,200 - 11961 mRNA_3593 0.89 0.3
127,201 + 11961 mRNA_3593 0.89 -1.4
127,205 + 11961 mRNA_3593 0.89 -0.3
127,342 - 0.2
127,366 + 0.0
127,372 + 0.4
127,375 - -0.3
127,483 + -0.1
127,486 + -0.4
127,487 - -0.9
127,504 - 0.1
127,523 - 0.3
127,527 - -1.6
127,653 - -0.6
127,681 + 0.6
127,692 - 0.5
127,720 + 1.5
127,835 + 11962 mRNA_3594 0.15 -0.9
127,989 + 11962 mRNA_3594 0.26 0.2
128,247 - 11962 mRNA_3594 0.44 -0.1
128,271 + 11962 mRNA_3594 0.45 -2.8
128,548 - 11962 mRNA_3594 0.64 -1.4
128,693 + 11962 mRNA_3594 0.74 0.8
129,007 + 1.1
129,304 - -0.4
129,856 - 11963 mRNA_3595 0.23 0.1