Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3591

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118835 to 120315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120588 to 122766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123173 to 125228 11960

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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120,792 - 0.6
120,857 - 11959 mRNA_3591 0.12 1.1
120,916 - 11959 mRNA_3591 0.15 1.0
120,926 + 11959 mRNA_3591 0.16 -0.3
120,936 - 11959 mRNA_3591 0.16 -2.0
121,029 + 11959 mRNA_3591 0.20 -0.4
121,378 + 11959 mRNA_3591 0.36 0.4
122,035 - 11959 mRNA_3591 0.66 0.3
122,118 + 11959 mRNA_3591 0.70 0.0
122,350 + 11959 mRNA_3591 0.81 -0.4
122,370 + 11959 mRNA_3591 0.82 -1.0
122,650 - -0.3
122,657 + -0.4
122,703 - -1.3
122,815 - -0.1
122,815 - -1.3
123,089 + 0.1