Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3551

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3550: 11918 - Hypothetical Protein, at 26790 to 27797 11918 mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28216 to 30545 11919 mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30770 to 33816 11920

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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27,332 + 11918 mRNA_3550 0.54 -0.9
27,494 + 11918 mRNA_3550 0.70 -0.3
27,737 + -0.5
28,981 - 11919 mRNA_3551 0.33 -0.1
29,331 - 11919 mRNA_3551 0.48 0.1
29,644 + 11919 mRNA_3551 0.61 1.0
29,658 - 11919 mRNA_3551 0.62 -0.2
29,739 - 11919 mRNA_3551 0.65 -0.2
29,766 - 11919 mRNA_3551 0.67 0.1
29,896 + 11919 mRNA_3551 0.72 0.3
30,066 - 11919 mRNA_3551 0.79 -0.0
30,500 - -0.7
30,650 + -0.3
30,653 - -0.5
30,661 + -0.9
30,789 + -0.7
30,895 + 1.0
30,908 - -0.4
30,975 - 0.4
31,065 + 1.6
31,190 - 11920 mRNA_3552 0.14 0.2
31,377 + 11920 mRNA_3552 0.20 0.5