Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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2 + -0.6
2 + -1.1
2 + -1.3
2 + 0.4
2 + 0.2
2 + 0.2
2 + 0.3
14 + 0.7
26 + 0.3
36 + -1.2
39 + -0.7
42 - -0.4
50 + 0.5
50 + 0.8
50 + 0.1
53 - -0.0
57 + -0.6
59 - 0.1
103 + 0.2
104 + 0.9
112 + -1.1
117 - 0.1
120 - -1.1
140 - -1.0
141 + 0.7
146 + -1.2
150 + 0.4
199 - 11905 mRNA_3537 0.12 0.5
200 + 11905 mRNA_3537 0.12 0.1
200 - 11905 mRNA_3537 0.12 0.1
200 - 11905 mRNA_3537 0.12 0.6
200 - 11905 mRNA_3537 0.12 0.7
201 - 11905 mRNA_3537 0.12 0.2
207 + 11905 mRNA_3537 0.13 0.6
207 + 11905 mRNA_3537 0.13 -0.6
207 + 11905 mRNA_3537 0.13 0.3
209 + 11905 mRNA_3537 0.13 -0.0
210 + 11905 mRNA_3537 0.13 0.0
213 + 11905 mRNA_3537 0.14 0.3
213 + 11905 mRNA_3537 0.14 0.9
214 + 11905 mRNA_3537 0.14 0.7
214 + 11905 mRNA_3537 0.14 0.2
218 + 11905 mRNA_3537 0.14 0.4
221 + 11905 mRNA_3537 0.15 0.5
222 + 11905 mRNA_3537 0.15 -0.7
222 + 11905 mRNA_3537 0.15 0.3
222 + 11905 mRNA_3537 0.15 -0.8
223 - 11905 mRNA_3537 0.15 0.4
225 - 11905 mRNA_3537 0.15 -0.8
227 - 11905 mRNA_3537 0.15 -0.2
227 + 11905 mRNA_3537 0.15 -2.7
230 + 11905 mRNA_3537 0.16 0.0
230 + 11905 mRNA_3537 0.16 0.6
246 - 11905 mRNA_3537 0.18 0.5
246 - 11905 mRNA_3537 0.18 1.2
251 + 11905 mRNA_3537 0.18 -0.6
252 + 11905 mRNA_3537 0.18 0.5
260 + 11905 mRNA_3537 0.19 -0.1
262 + 11905 mRNA_3537 0.20 -3.8
265 - 11905 mRNA_3537 0.20 -0.0
272 - 11905 mRNA_3537 0.21 0.0
274 + 11905 mRNA_3537 0.21 -0.0
325 - 11905 mRNA_3537 0.27 -1.4
326 - 11905 mRNA_3537 0.27 -0.0
341 + 11905 mRNA_3537 0.29 0.1
359 + 11905 mRNA_3537 0.31 -0.2
362 + 11905 mRNA_3537 0.32 0.4
367 - 11905 mRNA_3537 0.32 0.9
368 + 11905 mRNA_3537 0.33 -0.3
368 + 11905 mRNA_3537 0.33 -0.8
368 + 11905 mRNA_3537 0.33 -1.5
373 + 11905 mRNA_3537 0.33 0.2
373 - 11905 mRNA_3537 0.33 -0.3
373 - 11905 mRNA_3537 0.33 0.0
379 + 11905 mRNA_3537 0.34 -0.1
380 + 11905 mRNA_3537 0.34 1.5
417 + 11905 mRNA_3537 0.39 -0.6
452 + 11905 mRNA_3537 0.43 0.6
472 + 11905 mRNA_3537 0.45 1.0
484 + 11905 mRNA_3537 0.47 0.5
489 - 11905 mRNA_3537 0.47 -1.0
503 - 11905 mRNA_3537 0.49 -0.0
511 + 11905 mRNA_3537 0.50 1.7
518 + 11905 mRNA_3537 0.51 -0.6
523 + 11905 mRNA_3537 0.52 -0.1
533 + 11905 mRNA_3537 0.53 -0.1
539 + 11905 mRNA_3537 0.54 0.7
550 + 11905 mRNA_3537 0.55 -0.5
579 + 11905 mRNA_3537 0.58 -0.3
638 - 11905 mRNA_3537 0.66 -1.2
640 - 11905 mRNA_3537 0.66 -1.2
657 + 11905 mRNA_3537 0.68 0.4
762 - 11905 mRNA_3537 0.81 -0.9
768 + 11905 mRNA_3537 0.82 0.4
791 - 11905 mRNA_3537 0.84 0.2
801 + 11905 mRNA_3537 0.86 -0.6
804 + 11905 mRNA_3537 0.86 0.7
822 + 11905 mRNA_3537 0.88 -0.6
827 + 11905 mRNA_3537 0.89 -0.3
842 + -0.3
842 + 0.2
845 - -0.8
962 - 0.2
990 + -0.8
1,074 + -0.9
1,080 - -2.9
1,107 + 0.6
1,110 - 1.6
1,123 + -0.2
1,143 + -0.7
1,256 - -0.1
1,278 + -0.2
1,336 + -0.3
1,371 - -1.1
1,404 - 0.1
1,429 + -1.1
1,450 + 1.5
1,528 + 1.5
1,550 + 0.4
1,647 - -0.4
1,653 + 0.1
1,661 - -1.0
1,663 + -1.1
1,719 + -0.4
1,720 + 0.2
1,760 + -1.0
1,814 - -1.1
1,902 - 0.3