Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3509

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3508: 11876 - K00273 DAO, aao D-amino-acid oxidase, at 262160 to 263731 11876 mRNA_3509: 11877 - K01464 DPYS, dht, hydA dihydropyrimidinase, at 263913 to 265913 11877 mRNA_3510: 11878 - K00889 PIP5K 1-phosphatidylinositol-4-phosphate 5-kinase, at 266286 to 268239 11878

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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263,057 - 11876 mRNA_3508 0.57 -1.1
263,204 - 11876 mRNA_3508 0.66 -0.5
263,539 + 11876 mRNA_3508 0.88 -0.1
263,561 + 11876 mRNA_3508 0.89 0.2
263,674 + -0.8
263,703 + -1.3
263,885 - -0.1
263,944 - -1.5
263,975 - -0.3
264,072 - -1.2
264,328 + 11877 mRNA_3509 0.21 0.9
264,688 + 11877 mRNA_3509 0.39 0.8
264,753 - 11877 mRNA_3509 0.42 -0.2
264,858 + 11877 mRNA_3509 0.47 0.1
264,871 + 11877 mRNA_3509 0.48 -0.7
264,986 + 11877 mRNA_3509 0.54 0.0
265,295 + 11877 mRNA_3509 0.69 -0.7
265,759 - 0.4
265,765 + 0.8
266,058 + 1.2
266,126 - -1.0
266,231 - 0.2