Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3417

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3416: 11784 - Hypothetical Protein, at 42396 to 43510 11784 mRNA_3417: 11785 - Hypothetical Protein, at 43744 to 46912 11785 mRNA_3418: 11786 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 47383 to 48909 11786

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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42,777 - 11784 mRNA_3416 0.34 -0.7
42,777 + 11784 mRNA_3416 0.34 -0.5
43,052 - 11784 mRNA_3416 0.59 -1.5
43,346 - 11784 mRNA_3416 0.85 -0.3
44,090 + 11785 mRNA_3417 0.11 -0.4
44,226 - 11785 mRNA_3417 0.15 -0.1
44,942 + 11785 mRNA_3417 0.38 0.4
44,944 - 11785 mRNA_3417 0.38 0.5
45,089 - 11785 mRNA_3417 0.42 -1.1
45,095 + 11785 mRNA_3417 0.43 -0.1
45,112 + 11785 mRNA_3417 0.43 -1.1
45,218 - 11785 mRNA_3417 0.47 -0.2
45,251 + 11785 mRNA_3417 0.48 -0.3
45,358 + 11785 mRNA_3417 0.51 0.0
45,367 + 11785 mRNA_3417 0.51 0.3
45,832 - 11785 mRNA_3417 0.66 1.2
46,108 - 11785 mRNA_3417 0.75 -0.2
46,545 - 11785 mRNA_3417 0.88 0.6
46,554 - 11785 mRNA_3417 0.89 -0.5
46,560 + 11785 mRNA_3417 0.89 -0.1
46,679 - -0.2
46,689 - 0.2
46,695 - -0.3
46,983 - -0.7
46,989 - -0.2
46,998 + -0.7
47,100 + -1.4
47,112 + -0.7
47,138 - 1.8
47,157 - 0.5
47,157 + -1.5
47,159 + 0.4
47,161 + 0.3
47,267 - -0.0
47,270 + -0.3
47,277 + 0.5
47,299 + -0.0
47,301 + -1.4
47,308 - -0.3
47,308 - -0.5
47,312 + -0.3
47,445 + -0.9