Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3324

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3323: 11691 - HMMPfam-RTA1 like protein-PF04479, at 395494 to 396830 11691 mRNA_3324: 11692 - HMMPfam-RTA1 like protein-PF04479, at 397238 to 398541 11692 mRNA_3325: 11693 - Hypothetical Protein, at 398718 to 399832 11693

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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396,275 - 11691 mRNA_3323 0.58 0.0
396,446 + 11691 mRNA_3323 0.71 -0.7
396,581 + 11691 mRNA_3323 0.81 -0.7
396,998 + -1.6
397,010 - -0.0
397,011 - 0.9
397,052 + 2.3
397,151 - -0.4
397,170 - 0.7
397,173 + -0.4
397,182 - -0.1
397,196 + 1.8
397,296 - 0.3
397,723 - 11692 mRNA_3324 0.37 0.4
398,171 - 11692 mRNA_3324 0.72 -0.9
398,741 - 0.1
398,864 - 11693 mRNA_3325 0.13 -0.2
398,894 + 11693 mRNA_3325 0.16 -0.4