Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3292

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3291: 11659 - BLAST expressed protein [Schizophyllum commune H4-8], at 308905 to 310428 11659 mRNA_3292: 11660 - KOG1339 Aspartyl protease, at 311013 to 311790 11660

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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310,115 + 11659 mRNA_3291 0.79 -0.1
310,116 + 11659 mRNA_3291 0.79 0.0
310,273 - 11659 mRNA_3291 0.90 -0.1
310,292 - 0.5
310,569 - 0.9
310,578 - -0.3
310,594 - -0.9
310,598 - -0.4
310,629 + 0.6
310,629 - 0.1
310,652 - 0.8
310,654 - -0.3
310,655 + 0.3
310,669 - -0.3
310,677 - 0.0
310,706 - -0.6
310,710 - 0.5
310,710 - -0.3
310,748 + -0.9
310,991 - 0.8
311,141 + 11660 mRNA_3292 0.16 -0.2
311,291 - 11660 mRNA_3292 0.36 0.5
311,294 - 11660 mRNA_3292 0.36 0.3
311,300 + 11660 mRNA_3292 0.37 1.0
311,405 - 11660 mRNA_3292 0.50 0.2
311,468 - 11660 mRNA_3292 0.58 0.2
311,574 - 11660 mRNA_3292 0.72 0.2
311,620 + 11660 mRNA_3292 0.78 -0.5
311,632 - 11660 mRNA_3292 0.80 0.2
311,648 - 11660 mRNA_3292 0.82 0.2
311,732 - 0.3
311,740 + 0.8
311,755 - -0.8
311,755 + 0.9
311,759 + 0.3
311,764 - 0.6
311,764 - -0.0
311,765 + 1.3
311,772 + 0.0
311,773 - 1.1
311,774 - -0.2
311,775 - 0.3
311,775 - -1.0
311,777 - -0.4
311,777 + 0.2
311,778 + -0.5
311,781 - 0.9
311,781 - -1.1
311,783 + -0.7
311,894 - -1.3
311,956 + -0.8
312,247 + -0.1
312,259 + -0.8
312,304 - 1.2
312,306 - 0.0
312,308 + 0.4
312,308 + 0.3
312,314 - 0.3
312,314 - -0.0
312,316 - 0.5
312,319 - -0.0
312,321 + -0.1
312,341 + -0.3
312,341 + 1.8
312,345 + -0.2
312,351 + -0.0
312,353 - -0.3
312,354 - -0.2
312,355 - -0.2
312,361 + 0.2
312,381 + 0.7
312,393 - 0.2
312,408 - -3.2
312,428 + -0.9
312,456 - -0.3
312,460 - 0.1
312,474 - -0.1
312,482 - -0.4
312,485 - -0.2
312,490 - 1.7
312,493 - 1.7
312,716 + 0.2
312,716 + 0.3
312,753 + -0.1