Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3254

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3253: 11621 - KOG1201 Hydroxysteroid 17-beta dehydrogenase 11, at 218422 to 220105 11621 mRNA_3254: 11622 - K12161 URM1 ubiquitin related modifier 1, at 220282 to 220812 11622 mRNA_3255: 11623 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 221213 to 223248 11623

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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219,378 - 11621 mRNA_3253 0.57 0.3
219,662 - 11621 mRNA_3253 0.74 -0.1
219,840 - 11621 mRNA_3253 0.84 -0.8
219,997 + 0.8
220,124 + 0.8
220,728 + 11622 mRNA_3254 0.84 -2.9
220,855 + -0.4
220,874 - -0.2
220,883 - -0.8
220,892 + 0.3
220,981 - 0.3
221,012 - 0.6
221,024 - 0.9
221,027 - 0.3
221,285 - 0.6
221,473 + 11623 mRNA_3255 0.13 0.0