Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3236

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3235: 11603 - Hypothetical Protein, at 170278 to 173457 11603 mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604 mRNA_3237: 11605 - K10357 MYO5 myosin V, at 176488 to 184590 11605

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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172,724 + 11603 mRNA_3235 0.77 0.4
172,993 - 11603 mRNA_3235 0.85 -0.9
173,184 + 0.5
173,847 + 0.6
173,892 - 0.2
174,169 - 11604 mRNA_3236 0.22 0.4
174,570 - 11604 mRNA_3236 0.42 0.3
174,593 + 11604 mRNA_3236 0.43 1.3
175,420 + 11604 mRNA_3236 0.82 0.5
175,721 - 0.3
175,861 - -0.2
176,024 - -0.7
176,050 + -0.4
176,179 - 0.2
176,189 - 0.7
176,190 + 1.0
176,192 + -0.1
176,192 + 0.1
176,195 + 0.3
176,198 - 0.4
176,203 + 0.4
176,209 - 0.3
176,216 - 0.5
176,319 + 0.8
176,327 + 0.1
176,329 - 0.2
176,329 - -0.3
176,335 + -0.6
176,343 + 0.1
176,345 + 1.3
176,346 - -0.1
176,347 - 0.3
176,348 + 0.1
176,350 + -0.8
176,351 - -0.7
176,361 + 1.5
176,371 + 0.9
176,379 + -0.7
176,502 - 1.8
176,510 - 1.2
176,579 - 1.7
176,615 - 0.5
176,643 + 2.8