Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3234

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3233: 11601 - KOG1339 Aspartyl protease, at 161469 to 163797 11601 mRNA_3234: 11602 - Hypothetical Protein, at 163979 to 166240 11602

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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163,328 - 11601 mRNA_3233 0.80 -0.9
163,399 + 11601 mRNA_3233 0.83 0.7
163,460 - 11601 mRNA_3233 0.85 -0.3
163,620 - 0.4
163,638 - -0.1
163,643 + 0.6
163,757 + -1.1
163,950 - 1.7
163,952 + -0.9
164,090 - 0.1
164,207 - 11602 mRNA_3234 0.10 0.7
164,330 - 11602 mRNA_3234 0.16 1.6
164,520 + 11602 mRNA_3234 0.24 0.2
164,875 - 11602 mRNA_3234 0.40 -0.2
165,135 + 11602 mRNA_3234 0.51 -0.5
165,229 + 11602 mRNA_3234 0.55 0.9
165,758 - 11602 mRNA_3234 0.79 -0.9
166,174 + -0.0
166,589 - -0.4
166,694 + -0.9
166,701 - -0.9
166,752 - -0.2
166,897 - 0.5
166,994 - 0.2
167,137 + -1.6