Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3067

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235279 to 236676 11435 mRNA_3068: 11436 - K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B, at 236980 to 239400 11436

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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234,314 + 0.5
234,413 - 0.4
234,424 - 0.2
234,453 - -0.2
234,455 - 0.0
234,591 + -0.4
234,722 - 0.5
234,745 + -0.2
234,865 + 0.9
234,875 - 1.5
234,880 - 0.4
234,890 + 0.0
234,992 + 0.9
234,993 + -0.5
235,013 - -0.1
235,017 - 0.2
235,055 + 0.8
235,060 - 0.1
235,067 - -0.0
235,070 + 1.0
235,075 - 0.3
235,078 + 0.2
235,082 - -0.0
235,086 - 0.1
235,087 + -0.2
235,088 + -0.3
235,089 + -0.7
235,095 + 0.7
235,098 + 0.3
235,098 + 0.6
235,098 - 0.8
235,099 - -0.7
235,101 + 0.7
235,101 + 0.3
235,113 - 0.2
235,214 + 0.9
235,231 - -0.2
235,231 - 0.5
235,234 + -0.1
235,239 + 0.9
235,251 + -0.1
235,259 - -0.6
235,301 + 0.8
235,348 - 0.1
235,359 + 1.0
235,361 - -0.2
235,362 - -0.6
235,365 + -0.2
235,379 - -0.1
235,389 - -0.8
235,403 - 0.3
235,405 - 0.1
235,410 - -2.5
235,421 + 11435 mRNA_3067 0.10 0.0
235,430 - 11435 mRNA_3067 0.11 -0.2
235,580 + 11435 mRNA_3067 0.22 -0.1
235,595 + 11435 mRNA_3067 0.23 -0.2
235,692 - 11435 mRNA_3067 0.30 0.7
235,714 - 11435 mRNA_3067 0.31 0.8
235,749 + 11435 mRNA_3067 0.34 0.3
235,753 - 11435 mRNA_3067 0.34 0.6
235,987 - 11435 mRNA_3067 0.51 0.0
236,002 - 11435 mRNA_3067 0.52 0.9
236,005 + 11435 mRNA_3067 0.52 0.8
236,525 - 11435 mRNA_3067 0.89 -0.8
236,631 - 0.4
236,681 - -0.3
236,692 - -0.8
236,706 + 0.5
236,726 - 0.9
236,848 - 0.8
236,853 + -0.2
236,971 - 0.0
236,973 + 1.7
236,975 - 0.7
237,304 - 11436 mRNA_3068 0.13 0.1
237,434 - 11436 mRNA_3068 0.19 -1.2
237,434 + 11436 mRNA_3068 0.19 -1.2
237,438 - 11436 mRNA_3068 0.19 0.1
237,544 - 11436 mRNA_3068 0.23 0.2
237,574 - 11436 mRNA_3068 0.25 -1.4