Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3064

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3063: 11431 - Hypothetical Protein, at 227293 to 229777 11431 mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229860 to 230752 11432 mRNA_3065: 11433 - Hypothetical Protein, at 230805 to 232101 11433

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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228,961 + 11431 mRNA_3063 0.67 -1.8
228,978 - 11431 mRNA_3063 0.68 -0.1
229,109 - 11431 mRNA_3063 0.73 -0.1
229,135 + 11431 mRNA_3063 0.74 0.6
229,428 + 11431 mRNA_3063 0.86 0.0
229,618 + 0.0
229,737 + -0.3
229,737 + 0.4
229,829 - -0.7
229,909 - -0.9
229,958 + 11432 mRNA_3064 0.11 -0.8
229,985 - 11432 mRNA_3064 0.14 -1.1
229,999 - 11432 mRNA_3064 0.16 -0.1
230,450 + 11432 mRNA_3064 0.66 0.5
230,730 - -0.1
230,789 - -0.5
230,883 + -1.7
230,892 + 0.8
231,040 - 11433 mRNA_3065 0.18 0.1
231,169 - 11433 mRNA_3065 0.28 0.5
231,324 + 11433 mRNA_3065 0.40 -0.3
231,459 - 11433 mRNA_3065 0.50 0.2
231,461 - 11433 mRNA_3065 0.51 0.1
231,465 - 11433 mRNA_3065 0.51 0.2
231,467 + 11433 mRNA_3065 0.51 0.3
231,468 + 11433 mRNA_3065 0.51 0.8
231,489 + 11433 mRNA_3065 0.53 -0.5
231,592 + 11433 mRNA_3065 0.61 -0.2
231,632 + 11433 mRNA_3065 0.64 -0.7
231,752 + 11433 mRNA_3065 0.73 -0.1