Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3036

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151976 to 152968 11403 mRNA_3036: 11404 - Hypothetical Protein, at 153289 to 156377 11404 mRNA_3037: 11405 - Hypothetical Protein, at 156746 to 157530 11405

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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152,871 + -0.3
153,073 + -0.1
153,102 + -1.4
153,236 + -0.6
153,237 + 1.0
153,253 + 0.7
153,268 - 0.3
153,418 - 1.1
153,656 - 11404 mRNA_3036 0.12 -0.3
153,656 + 11404 mRNA_3036 0.12 0.5
153,663 + 11404 mRNA_3036 0.12 0.7
153,670 - 11404 mRNA_3036 0.12 -0.3
153,688 - 11404 mRNA_3036 0.13 -1.2
153,847 + 11404 mRNA_3036 0.18 1.1
154,244 - 11404 mRNA_3036 0.31 -0.3
155,026 + 11404 mRNA_3036 0.56 0.7
155,134 - 11404 mRNA_3036 0.60 -0.3
155,162 + 11404 mRNA_3036 0.61 1.7
155,264 - 11404 mRNA_3036 0.64 -0.9
155,287 - 11404 mRNA_3036 0.65 -1.0
155,629 + 11404 mRNA_3036 0.76 -0.2
155,786 + 11404 mRNA_3036 0.81 -0.9
155,787 + 11404 mRNA_3036 0.81 0.0
155,927 + 11404 mRNA_3036 0.85 -0.2
156,331 - -1.1
156,489 - -0.4
156,491 - -1.0
156,660 + 0.9
156,939 + 11405 mRNA_3037 0.25 1.1
156,991 - 11405 mRNA_3037 0.31 0.3
157,091 - 11405 mRNA_3037 0.44 0.7
157,093 - 11405 mRNA_3037 0.44 -0.3
157,104 - 11405 mRNA_3037 0.46 0.4
157,205 - 11405 mRNA_3037 0.58 -0.2
157,242 - 11405 mRNA_3037 0.63 -1.2
157,246 + 11405 mRNA_3037 0.64 -0.2
157,301 + 11405 mRNA_3037 0.71 0.9