Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3031

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3030: 11398 - Hypothetical Protein, at 137392 to 137958 11398 mRNA_3031: 11399 - KOG0527 HMG-box transcription factor, at 138430 to 140039 11399 mRNA_3032: 11400 - K09489 HSPA4 heat shock 70kDa protein 4, at 140473 to 143328 11400

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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137,467 - 11398 mRNA_3030 0.13 0.2
137,521 - 11398 mRNA_3030 0.23 -0.0
137,566 - 11398 mRNA_3030 0.31 0.7
137,864 - 11398 mRNA_3030 0.83 -0.3
137,872 - 11398 mRNA_3030 0.85 0.6
137,882 - 11398 mRNA_3030 0.86 -0.3
137,918 + -0.2
138,012 - -0.2
139,054 - 11399 mRNA_3031 0.39 -0.1
139,203 + 11399 mRNA_3031 0.48 -0.6
139,220 - 11399 mRNA_3031 0.49 -1.6
139,230 - 11399 mRNA_3031 0.50 0.9
139,261 + 11399 mRNA_3031 0.52 -0.5
139,533 + 11399 mRNA_3031 0.69 0.3
140,087 - -0.5
140,093 - 1.7
140,254 + 0.2
140,375 + -0.2