Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1 + -0.6
1 + -0.4
1 + 1.0
21 + 0.4
21 + -0.1
21 + -0.5
41 + 0.5
42 + 0.2
44 + 0.5
79 - -0.4
79 + -0.4
149 - 0.3
264 + 11348 mRNA_2980 0.17 0.9
266 - 11348 mRNA_2980 0.17 0.7
338 - 11348 mRNA_2980 0.22 -0.5
341 + 11348 mRNA_2980 0.22 0.3
454 - 11348 mRNA_2980 0.30 0.3
484 - 11348 mRNA_2980 0.32 1.0
489 - 11348 mRNA_2980 0.33 0.4
491 + 11348 mRNA_2980 0.33 0.1
507 + 11348 mRNA_2980 0.34 0.7
510 + 11348 mRNA_2980 0.34 -0.1
516 - 11348 mRNA_2980 0.35 -0.1
654 + 11348 mRNA_2980 0.44 0.4
719 + 11348 mRNA_2980 0.49 0.7
1,007 + 11348 mRNA_2980 0.69 0.2
1,048 - 11348 mRNA_2980 0.72 0.4
1,218 - 11348 mRNA_2980 0.84 -0.3
1,248 + 11348 mRNA_2980 0.86 0.2
1,364 + -0.1
1,374 - -0.2
1,401 + -0.4
1,452 + -1.3
1,488 - -0.2
1,503 + -0.2
1,513 + 0.5
1,515 - -0.8
1,551 + 0.4
1,634 + -0.7
1,635 + 0.3
1,657 + 1.2
1,668 + -0.1
1,805 - 0.5
1,805 + 0.3
1,818 + -0.0
1,882 + 0.1
1,934 + 1.4
1,948 + 0.4
1,949 - -0.6
1,974 + 0.5
1,992 + 0.8
1,992 + -0.1
1,993 + -0.7
2,011 + -0.2
2,082 + -0.6
2,084 - 1.4
2,086 + 0.5
2,086 + 0.7
2,086 + 0.3
2,095 + 0.0
2,097 - -2.6
2,098 + 0.4
2,115 + 0.1
2,117 + 0.7
2,120 + 0.5
2,121 - -0.2
2,121 - 0.7
2,125 - -0.2
2,126 + -0.1
2,131 + -0.8
2,131 + 0.6
2,131 + -0.1
2,133 + -0.3
2,243 + 0.8
2,265 + -1.8
2,301 + 1.1
2,320 + 0.2
2,324 - -0.6
2,357 + -0.7