Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2973

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2972: 11340 - K03850 ALG10 alpha-1,2-glucosyltransferase, at 686136 to 688131 11340 mRNA_2973: 11341 - K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase, at 688176 to 690178 11341 mRNA_2974: 11342 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 690635 to 692698 11342

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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687,292 + 11340 mRNA_2972 0.58 0.5
687,292 + 11340 mRNA_2972 0.58 -0.0
687,292 + 11340 mRNA_2972 0.58 0.5
687,304 + 11340 mRNA_2972 0.59 -0.4
687,325 + 11340 mRNA_2972 0.60 -0.2
687,328 - 11340 mRNA_2972 0.60 -1.2
687,329 + 11340 mRNA_2972 0.60 -0.0
687,408 + 11340 mRNA_2972 0.64 0.5
687,411 + 11340 mRNA_2972 0.64 -1.2
687,577 - 11340 mRNA_2972 0.72 -0.1
687,577 - 11340 mRNA_2972 0.72 -1.6
687,594 + 11340 mRNA_2972 0.73 -0.3
687,595 - 11340 mRNA_2972 0.73 -0.4
687,599 - 11340 mRNA_2972 0.73 -0.1
687,607 - 11340 mRNA_2972 0.74 0.0
687,708 - 11340 mRNA_2972 0.79 0.1
687,763 - 11340 mRNA_2972 0.82 0.1
687,763 - 11340 mRNA_2972 0.82 -2.8
687,766 + 11340 mRNA_2972 0.82 0.3
688,004 - -4.1
688,004 - -0.1
688,018 - 0.9
688,031 + -0.1
688,165 + -0.9
688,288 - -3.5
688,289 - -3.0
688,496 + 11341 mRNA_2973 0.16 -1.8
688,575 - 11341 mRNA_2973 0.20 -2.7
688,585 + 11341 mRNA_2973 0.20 -2.6
688,756 - 11341 mRNA_2973 0.29 -2.0
688,901 + 11341 mRNA_2973 0.36 -2.1
689,008 - 11341 mRNA_2973 0.42 -2.8
689,350 - 11341 mRNA_2973 0.59 -1.9
689,434 + 11341 mRNA_2973 0.63 -2.9
689,468 + 11341 mRNA_2973 0.65 -2.6
689,656 + 11341 mRNA_2973 0.74 -3.1
689,670 + 11341 mRNA_2973 0.75 -0.9
689,775 - 11341 mRNA_2973 0.80 -2.6
689,782 + 11341 mRNA_2973 0.80 -2.3
689,912 - 11341 mRNA_2973 0.87 -2.3
689,932 + 11341 mRNA_2973 0.88 -3.4
690,059 + -1.5
690,061 + -0.7
690,090 + -1.5
690,247 - 1.3
690,352 - -0.3
690,410 - -2.1
690,525 + -0.7
690,658 + 0.5
690,806 - 0.7
690,806 - 0.1
690,822 + -0.5
690,842 + 11342 mRNA_2974 0.10 0.3
690,975 + 11342 mRNA_2974 0.16 1.0
690,978 - 11342 mRNA_2974 0.17 0.4
690,996 + 11342 mRNA_2974 0.17 1.1