Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2965

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205 11332 mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525 11333 mRNA_2966: 11334 - KOG3238 Chloride ion current inducer protein, at 669918 to 671056 11334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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665,842 + 11332 mRNA_2964 0.82 0.6
666,254 - 2.8
666,271 + -2.3
666,423 + -0.0
666,551 - -1.2
666,612 - -0.7
666,632 + -0.5
666,634 - 0.3
666,673 + 0.7
666,702 + 0.0
666,930 + -0.3
667,019 + 11333 mRNA_2965 0.11 -1.7
667,650 - 11333 mRNA_2965 0.34 0.1
667,668 - 11333 mRNA_2965 0.34 -0.8
669,037 - 11333 mRNA_2965 0.83 -1.4
669,079 - 11333 mRNA_2965 0.84 -0.6
669,089 + 11333 mRNA_2965 0.85 -1.4
669,245 + 1.1
669,552 - 0.8