Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2954

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2954: 11322 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790, at 640815 to 641841 11322

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
639,815 - 0.1
639,855 - -0.1
639,922 - 0.3
640,129 - -0.1
640,412 + 0.3
640,457 + -0.4
640,481 - -0.2
640,512 - -0.1
640,517 - 0.9
640,517 + 0.7
640,521 - 0.6
640,535 - 0.4
640,539 + 1.6
640,539 + 1.5
640,542 - 0.3
640,553 - 0.4
640,554 + 0.1
640,573 - 1.0
640,585 - -0.4
640,592 + -0.3
640,606 - 0.2
640,616 - 0.2
640,616 - -0.0
640,622 - 1.4
640,622 - -0.4
640,623 + -0.6
640,625 + 0.5
640,626 - -0.6
640,627 + -0.4
640,627 + -0.2
640,631 + 0.8
640,631 + -0.0
640,633 - -0.6
640,638 - -0.9
640,640 - 0.3
640,641 + -0.2
640,644 + -1.2
640,665 + -1.5
640,666 - 1.3
640,667 - 0.9
640,669 + 1.2
640,688 + 0.9
640,691 + 0.8
640,691 - -0.6
640,692 - 0.4
640,693 + -0.2
640,693 - 0.1
640,709 + -1.2
640,714 - -0.2
640,717 + -0.1
640,718 + -0.5
640,718 - -1.3
640,721 + -0.4
640,721 + 0.0
640,721 - 0.9
640,725 + 0.4
640,732 - 0.3
640,737 - 0.2
640,763 - 1.2
640,763 + 0.1
640,763 + 0.1
640,763 + 0.1
640,891 + -0.2
640,913 + -0.2
640,917 + 0.9
641,197 + 11322 mRNA_2954 0.37 -0.1
641,203 - 11322 mRNA_2954 0.38 0.6
641,499 - 11322 mRNA_2954 0.67 0.1
641,596 + 11322 mRNA_2954 0.76 -0.1
641,608 - 11322 mRNA_2954 0.77 0.3
641,952 + 0.5
641,987 + -0.3
642,058 - -1.1
642,066 - -0.8
642,108 + -0.8
642,177 - 0.1
642,603 + 0.2
642,624 + 0.1
642,627 - -1.2