Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2918

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2918: 11286 - HMMPfam-Acetyltransferase (GNAT) domain-PF13523,SMART-Siderophore biosynthesis protein domain-SM01006,SUPERFAMILY--SSF55729, at 554033 to 555107 11286 mRNA_2919: 11287 - BLAST Protein FAM186A [Mus musculus] [Rhizoctonia solani], at 555842 to 558142 11287

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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553,042 - -0.2
553,077 + 0.6
553,126 + 2.8
553,265 - -0.2
553,268 - 0.6
553,274 - -0.6
553,284 + 0.1
553,284 - 0.7
553,335 + -1.6
553,339 + 1.0
553,342 + -0.2
553,431 + 0.1
553,433 + -0.2
553,468 + 1.0
553,574 - 0.8
553,580 - -0.1
553,580 - -0.3
553,590 + -0.4
553,597 + 0.1
553,692 + -1.7
553,800 + 1.2
553,869 + 0.2
553,887 + -1.3
554,152 + 11286 mRNA_2918 0.11 -0.2
554,435 - 11286 mRNA_2918 0.37 -0.1
554,460 - 11286 mRNA_2918 0.40 -2.4
555,123 + 0.4
555,321 + -0.0
555,463 - 0.1
555,478 + 0.6
555,770 + -0.4
555,770 + -0.9
555,773 - -0.5
555,790 + -0.4
555,807 + -0.8
555,940 + 1.0
555,968 + -0.9
556,080 - 11287 mRNA_2919 0.10 -0.1
556,092 + 11287 mRNA_2919 0.11 -0.7