Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2910

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2909: 11277 - Hypothetical Protein, at 515453 to 516872 11277 mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517093 to 520320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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516,147 + 11277 mRNA_2909 0.49 0.0
516,596 - 11277 mRNA_2909 0.80 0.2
516,762 - -1.1
516,767 - 0.2
516,902 - -0.3
516,904 + 0.1
516,930 + -0.2
516,935 - 0.8
516,951 + -0.2
517,238 + -0.0
517,251 + 0.0
517,415 + 0.2
517,636 + 11278 mRNA_2910 0.17 -1.0
517,659 + 11278 mRNA_2910 0.18 0.3
517,667 + 11278 mRNA_2910 0.18 0.5
517,952 + 11278 mRNA_2910 0.27 0.5
517,952 + 11278 mRNA_2910 0.27 1.1
518,267 + 11278 mRNA_2910 0.36 -0.6
518,270 + 11278 mRNA_2910 0.36 -0.5
518,510 - 11278 mRNA_2910 0.44 -0.2
518,629 - 11278 mRNA_2910 0.48 0.0
518,659 - 11278 mRNA_2910 0.49 -0.3
518,680 + 11278 mRNA_2910 0.49 -0.9
518,681 - 11278 mRNA_2910 0.49 0.4
519,237 + 11278 mRNA_2910 0.66 -0.2
519,499 + 11278 mRNA_2910 0.75 0.3
519,797 - 11278 mRNA_2910 0.84 -1.1
519,810 + 11278 mRNA_2910 0.84 -0.8
519,974 + 11278 mRNA_2910 0.89 0.7
520,081 + 0.4
520,093 - 1.0
520,093 - 0.9
520,102 + 0.5