Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2867

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844 11234 mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403264 to 404865 11235 mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405461 to 407348 11236

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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402,385 - -1.3
402,389 + 0.2
402,527 + 0.0
402,680 + -0.5
402,973 - 0.1
402,977 + 0.2
403,015 - 0.7
403,389 - 1.2
403,578 + 11235 mRNA_2867 0.20 1.0
403,931 - 11235 mRNA_2867 0.42 -0.8
403,937 + 11235 mRNA_2867 0.42 0.1
404,086 + 11235 mRNA_2867 0.51 1.1
404,222 + 11235 mRNA_2867 0.60 0.3
404,390 - 11235 mRNA_2867 0.70 -0.5
404,502 - 11235 mRNA_2867 0.77 0.2
404,521 - 11235 mRNA_2867 0.78 -0.3
404,800 + -0.7
404,829 - 0.9
404,835 + 0.3
404,998 - 1.7
405,001 + 1.1
405,009 - 0.4
405,010 + -0.5
405,020 - 0.0
405,028 + -0.0
405,029 - 0.8
405,049 - 0.7
405,077 - 1.7
405,080 + 0.3
405,130 - -0.0
405,143 - 0.9
405,157 + 0.2
405,162 - -0.1
405,167 + 1.0
405,168 - 0.0
405,186 + -0.3
405,202 + 0.5
405,214 - 0.1
405,229 + 0.9
405,241 - -0.8
405,250 - 0.2
405,262 + 0.5
405,266 + 0.5
405,269 + -0.8
405,274 + -0.3
405,341 + 0.1
405,378 - 0.3
405,383 + 1.8
405,394 + -0.1
405,396 + 1.5