Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2798

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2796: 11164 - K08286 E2.7.11.- protein-serine/threonine kinase, at 236700 to 240335 11164 mRNA_2797: 11165 - HMMPfam-CBP4-PF07960, at 240577 to 240997 11165 mRNA_2798: 11166 - K03537 POP5 ribonuclease P/MRP protein subunit POP5, at 241326 to 242097 11166 mRNA_2799: 11167 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 242336 to 245006 11167

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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240,377 + 0.9
240,518 - -0.4
240,527 + 0.2
240,657 - 11165 mRNA_2797 0.19 -1.5
240,664 + 11165 mRNA_2797 0.21 0.1
240,794 - 11165 mRNA_2797 0.52 -0.1
240,820 - 11165 mRNA_2797 0.58 -1.3
240,840 + 11165 mRNA_2797 0.62 0.7
240,956 - -0.2
241,121 - -0.1
241,268 - 0.1
242,005 - 11166 mRNA_2798 0.88 -0.2
242,058 + -0.2
242,522 + -0.9
242,537 + 0.7
242,726 + 11167 mRNA_2799 0.15 -0.5