Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2771

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2770: 11138 - KOG0400 40S ribosomal protein S13, at 173510 to 175017 11138 mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175827 to 177001 11139 mRNA_2772: 11140 - SUPERFAMILY--SSF56112, at 177192 to 178295 11140

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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174,870 + -0.2
174,885 - -0.2
175,208 + -1.4
175,595 - 2.2
175,603 + -0.0
175,613 + -0.5
175,733 - 0.2
175,760 - 0.3
175,779 + -0.1
175,795 + -0.4
175,897 - -0.4
175,898 + -0.4
175,909 - 0.0
175,948 + 11139 mRNA_2771 0.10 0.8
176,015 + 11139 mRNA_2771 0.16 -1.1
176,079 - 11139 mRNA_2771 0.21 0.9
176,203 - 11139 mRNA_2771 0.32 0.4
176,204 - 11139 mRNA_2771 0.32 0.6
176,771 - 11139 mRNA_2771 0.80 1.5
177,068 + -0.1
177,259 - 0.1
177,515 - 11140 mRNA_2772 0.29 -0.8
177,566 - 11140 mRNA_2772 0.34 -0.9
177,662 - 11140 mRNA_2772 0.43 0.3
177,827 + 11140 mRNA_2772 0.58 -0.3
177,832 - 11140 mRNA_2772 0.58 0.4
177,869 - 11140 mRNA_2772 0.61 -1.5
177,974 + 11140 mRNA_2772 0.71 -0.5