Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2745

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113 mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127700 to 128562 11114

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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122,753 + -0.2
122,878 - -0.7
122,988 - -0.9
122,995 + 0.9
122,996 - -0.3
123,012 + 0.4
123,013 + -1.0
123,033 + -0.4
123,038 - -0.3
123,041 + -0.3
123,051 - -1.3
123,059 - -0.1
123,060 + -0.5
123,069 + 0.0
123,069 + -0.8
123,071 - 0.6
123,073 + 0.6
123,082 + -0.1
123,105 + -0.6
123,112 - -0.1
123,122 + 0.0
123,151 + -0.8
123,166 + 0.2
123,173 - -0.9
123,173 - -0.3
123,178 + -0.2
123,188 - 0.5
123,202 + -0.7
123,210 + 0.3
123,315 - -0.4
123,394 + -0.6
123,422 - -0.1
123,442 - 0.3
123,474 + -0.3
123,487 - 0.6
123,499 + -0.9
123,502 + 0.1
123,517 + -0.7
123,518 - 0.3
123,547 + -0.9
123,548 - 2.5
123,562 + 0.2
123,573 + -0.2
123,590 - 0.1
123,605 - -0.1
123,608 - -0.4
123,672 + 0.2
123,690 + 2.1
123,725 + 0.7
123,749 + 0.6
123,750 - -1.3
123,863 - -0.4
123,871 + 0.1
123,901 + -0.2
124,183 + 11113 mRNA_2745 0.12 1.2
124,185 - 11113 mRNA_2745 0.12 1.0
124,353 - 11113 mRNA_2745 0.16 0.8
124,355 - 11113 mRNA_2745 0.16 0.0
124,414 - 11113 mRNA_2745 0.18 -0.1
124,458 + 11113 mRNA_2745 0.19 0.6
124,709 - 11113 mRNA_2745 0.26 -0.3
124,794 - 11113 mRNA_2745 0.28 -0.6
124,794 + 11113 mRNA_2745 0.28 0.4
125,041 + 11113 mRNA_2745 0.35 1.1
125,048 - 11113 mRNA_2745 0.35 -1.1
125,398 - 11113 mRNA_2745 0.44 0.3
125,714 + 11113 mRNA_2745 0.53 0.3
125,794 + 11113 mRNA_2745 0.55 -0.3
125,855 + 11113 mRNA_2745 0.57 0.7
125,941 + 11113 mRNA_2745 0.59 0.3
126,259 - 11113 mRNA_2745 0.68 -0.1
126,267 + 11113 mRNA_2745 0.68 -0.4
126,362 + 11113 mRNA_2745 0.70 -0.2
126,570 + 11113 mRNA_2745 0.76 -1.5
126,715 + 11113 mRNA_2745 0.80 0.1
126,720 - 11113 mRNA_2745 0.80 1.4
126,846 + 11113 mRNA_2745 0.83 -0.3
126,969 - 11113 mRNA_2745 0.87 0.4
126,969 - 11113 mRNA_2745 0.87 -1.1
127,054 + 11113 mRNA_2745 0.89 -1.2
127,325 + -0.5
127,413 + -1.6
127,419 + -0.4
127,434 - 0.2