Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2689

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2688: 11056 - Hypothetical Protein, at 8682 to 9968 11056 mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10233 to 12338 11057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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9,677 - 11056 mRNA_2688 0.77 -0.1
9,797 - 11056 mRNA_2688 0.87 0.3
9,923 + -0.2
10,066 + 0.5
10,122 + -1.0
10,352 - 1.8
10,613 - 11057 mRNA_2689 0.18 -0.5
10,676 + 11057 mRNA_2689 0.21 0.8
10,948 + 11057 mRNA_2689 0.34 -0.0
10,955 + 11057 mRNA_2689 0.34 0.2
10,955 + 11057 mRNA_2689 0.34 -0.7
10,955 + 11057 mRNA_2689 0.34 0.0
11,175 - 11057 mRNA_2689 0.45 0.6
11,213 - 11057 mRNA_2689 0.47 -0.5
11,248 - 11057 mRNA_2689 0.48 1.3
11,374 + 11057 mRNA_2689 0.54 -0.6
11,433 - 11057 mRNA_2689 0.57 0.1
11,536 + 11057 mRNA_2689 0.62 -0.7
11,554 + 11057 mRNA_2689 0.63 -0.1
11,733 + 11057 mRNA_2689 0.71 -0.0
11,734 + 11057 mRNA_2689 0.71 0.8
11,792 + 11057 mRNA_2689 0.74 0.2
11,847 - 11057 mRNA_2689 0.77 0.4
11,848 + 11057 mRNA_2689 0.77 -0.1
11,960 + 11057 mRNA_2689 0.82 1.5
12,147 + 0.4
12,260 - 0.1
12,300 - 0.0
12,308 + 0.4
12,338 + 0.3
12,402 + -0.8
12,411 - -0.1
12,416 + 0.9
12,438 + -0.2
12,445 + -0.3
12,446 - 0.3
12,447 + 0.6
12,454 + 0.5
12,457 + 0.7
12,492 - -0.3
12,548 - 0.6
12,631 + -0.4
12,650 - 0.8
12,895 + -0.8
13,053 - 0.1
13,057 - 0.1
13,068 + -0.4
13,229 + -1.1
13,313 + -0.3