Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2682

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2681: 11049 - Hypothetical Protein, at 765943 to 766697 11049 mRNA_2682: 11050 - K00589 MET1 uroporphyrin-III C-methyltransferase, at 767694 to 769770 11050 mRNA_2683: 11051 - K07300 chaA, CAX Ca2+-H+ antiporter, at 769946 to 774939 11051

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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767,204 + 1.4
767,220 + -0.6
767,234 + 0.7
767,451 - 1.1
767,471 - -0.6
767,471 + 0.2
767,556 + 1.0
767,578 + 0.2
767,780 + 0.4
768,242 - 11050 mRNA_2682 0.26 0.6
768,350 - 11050 mRNA_2682 0.32 -0.7
768,351 - 11050 mRNA_2682 0.32 1.1
768,842 + 11050 mRNA_2682 0.55 0.1
768,928 - 11050 mRNA_2682 0.59 -0.3
769,104 - 11050 mRNA_2682 0.68 -0.1
769,708 - 1.5
769,779 + 1.8
769,825 + -0.1
769,911 - -0.5
770,065 + 0.1
770,157 + -0.3
770,200 - -1.2
770,328 + 0.2
770,451 - 11051 mRNA_2683 0.10 0.9
770,468 - 11051 mRNA_2683 0.10 -0.2
770,548 - 11051 mRNA_2683 0.12 0.0
770,562 + 11051 mRNA_2683 0.12 0.2
770,594 + 11051 mRNA_2683 0.13 0.9
770,754 - 11051 mRNA_2683 0.16 -0.0