Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2679

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2678: 11046 - KOG3102 Uncharacterized conserved protein, at 758219 to 759317 11046 mRNA_2679: 11047 - K14262 DUG2 di- and tripeptidase, at 759389 to 763569 11047 mRNA_2680: 11048 - Hypothetical Protein, at 764065 to 765232 11048

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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758,407 + 11046 mRNA_2678 0.17 1.5
758,710 - 11046 mRNA_2678 0.45 0.3
758,793 + 11046 mRNA_2678 0.52 0.6
759,076 + 11046 mRNA_2678 0.78 0.1
759,078 - 11046 mRNA_2678 0.78 0.2
759,176 + 11046 mRNA_2678 0.87 2.2
759,239 + -0.8
759,241 + -0.3
759,271 + 2.7
759,271 + 0.8
759,383 - 0.2
759,421 + 0.3
759,517 + 0.6
759,811 - 11047 mRNA_2679 0.10 -0.3
759,835 + 11047 mRNA_2679 0.11 -0.7
759,855 + 11047 mRNA_2679 0.11 0.2
759,940 - 11047 mRNA_2679 0.13 1.3
759,941 + 11047 mRNA_2679 0.13 0.1
760,064 - 11047 mRNA_2679 0.16 -0.5
760,100 - 11047 mRNA_2679 0.17 -0.3
760,117 + 11047 mRNA_2679 0.17 -0.2
760,244 + 11047 mRNA_2679 0.20 0.3
760,423 - 11047 mRNA_2679 0.25 1.3
760,604 - 11047 mRNA_2679 0.29 0.6
760,853 - 11047 mRNA_2679 0.35 -0.2
760,871 + 11047 mRNA_2679 0.35 -0.2
761,398 - 11047 mRNA_2679 0.48 -0.3
761,398 - 11047 mRNA_2679 0.48 -0.7
761,452 + 11047 mRNA_2679 0.49 1.1
761,557 - 11047 mRNA_2679 0.52 -0.3
762,322 + 11047 mRNA_2679 0.70 -0.9
762,495 - 11047 mRNA_2679 0.74 0.8
762,630 + 11047 mRNA_2679 0.78 0.0
762,689 - 11047 mRNA_2679 0.79 -1.0
762,737 + 11047 mRNA_2679 0.80 0.1
762,920 - 11047 mRNA_2679 0.84 -0.4
763,036 - 11047 mRNA_2679 0.87 1.0
763,041 + 11047 mRNA_2679 0.87 -0.6
763,175 + -0.4
763,187 + 0.4
763,314 - 1.0
763,333 - 0.1
763,484 + -0.9
763,490 + 0.4
763,530 + -0.4
763,628 + 0.2
763,629 + -2.9
763,684 + 0.5
763,755 + -0.3
763,767 - -1.4
763,789 - -0.1
763,932 - -0.1
764,075 - 0.5
764,105 - -0.4
764,111 + -0.0
764,269 + 11048 mRNA_2680 0.17 -0.3
764,478 - 11048 mRNA_2680 0.35 -0.6
764,489 - 11048 mRNA_2680 0.36 0.2
764,490 - 11048 mRNA_2680 0.36 -1.4
764,532 + 11048 mRNA_2680 0.40 -0.3