Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2639

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650946 to 653673 11006 mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654513 to 656042 11007 mRNA_2640: 11008 - Hypothetical Protein, at 656963 to 657920 11008

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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653,580 + -0.4
653,757 - -0.0
653,899 - -0.4
653,900 + -0.4
653,904 - 0.1
654,036 + -0.2
654,325 - -0.9
654,327 - -0.6
654,330 - -1.2
654,346 + -0.1
654,353 - -0.2
654,379 + -0.2
654,385 - 1.4
654,387 + 0.9
654,389 + 0.1
654,390 + 0.3
654,392 + -0.5
654,393 - -0.8
654,393 - -0.2
654,393 + -0.0
654,394 - 0.4
654,395 - -0.0
654,396 + 0.3
654,397 + -0.7
654,398 + -0.0
654,413 - 0.3
654,414 + -1.2
654,419 + -0.1
654,427 + 0.1
654,429 - -0.2
654,698 + 11007 mRNA_2639 0.12 1.6
654,798 + 11007 mRNA_2639 0.19 2.0
655,132 + 11007 mRNA_2639 0.40 -0.6
655,351 + 11007 mRNA_2639 0.55 -0.3
655,560 - 11007 mRNA_2639 0.68 -0.7
655,645 - 11007 mRNA_2639 0.74 0.6
655,663 + 11007 mRNA_2639 0.75 0.1
655,669 - 11007 mRNA_2639 0.76 -1.8
655,832 - 11007 mRNA_2639 0.86 -0.5
655,867 + 11007 mRNA_2639 0.88 0.1
655,882 + 11007 mRNA_2639 0.89 0.7
655,990 - -0.2
656,142 + 0.7
656,158 + -0.4
656,161 + -1.0
656,328 + 0.8
656,329 - 0.3
656,461 + 0.6
656,573 - 0.1
656,596 + -0.6
656,606 - 1.3
656,769 - 0.2
656,882 + 0.1