Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2633

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2632: 11000 - Hypothetical Protein, at 636103 to 638450 11000 mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638578 to 641420 11001 mRNA_2634: 11002 - KOG2234 Predicted UDP-galactose transporter, at 641734 to 644523 11002

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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637,722 - 11000 mRNA_2632 0.69 -0.1
637,722 - 11000 mRNA_2632 0.69 0.2
637,730 + 11000 mRNA_2632 0.69 -0.5
637,835 + 11000 mRNA_2632 0.74 -0.2
637,967 - 11000 mRNA_2632 0.79 -0.9
637,994 - 11000 mRNA_2632 0.81 0.2
638,111 + 11000 mRNA_2632 0.86 -0.2
638,157 - 11000 mRNA_2632 0.87 -0.3
638,689 + -2.5
638,943 + 11001 mRNA_2633 0.13 2.5
638,973 + 11001 mRNA_2633 0.14 0.4
639,105 - 11001 mRNA_2633 0.19 0.4
639,206 + 11001 mRNA_2633 0.22 0.5
639,304 - 11001 mRNA_2633 0.26 -0.2
639,394 + 11001 mRNA_2633 0.29 1.7
639,538 - 11001 mRNA_2633 0.34 0.8
639,559 - 11001 mRNA_2633 0.35 -0.5
639,849 + 11001 mRNA_2633 0.45 -0.2
640,056 + 11001 mRNA_2633 0.52 -0.1
640,166 - 11001 mRNA_2633 0.56 -1.0
640,280 + 11001 mRNA_2633 0.60 -0.3
640,317 - 11001 mRNA_2633 0.61 1.5
640,317 + 11001 mRNA_2633 0.61 -0.2
640,325 + 11001 mRNA_2633 0.61 0.3
640,336 + 11001 mRNA_2633 0.62 -0.9
640,718 + 11001 mRNA_2633 0.75 1.8
640,846 + 11001 mRNA_2633 0.80 -0.6
640,893 - 11001 mRNA_2633 0.81 -0.9
640,920 + 11001 mRNA_2633 0.82 0.1
641,032 + 11001 mRNA_2633 0.86 0.2
641,184 - -0.5
641,199 - 1.0
641,230 + -0.3
641,310 + -0.7
641,318 - -1.0
641,339 - -0.7
641,353 + 0.5
641,515 + -2.3
641,541 - -1.1
641,544 + 0.4
641,633 + -0.4
641,638 - 0.1
641,639 + 2.0
641,639 + -0.3
641,646 + -0.5
641,664 - -0.1
641,665 - 1.1
641,666 + -0.1
641,826 + -0.6
641,947 - -0.1
641,974 + 0.6