Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2544

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911 mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404821 to 406181 10912

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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404,000 - 10911 mRNA_2543 0.55 0.4
404,264 - 10911 mRNA_2543 0.81 -0.4
404,443 + 0.7
404,564 + -0.6
404,849 + 1.2
405,047 - 10912 mRNA_2544 0.17 -0.1
405,090 + 10912 mRNA_2544 0.20 -2.3
405,146 - 10912 mRNA_2544 0.24 0.3
405,295 - 10912 mRNA_2544 0.35 0.3
405,343 - 10912 mRNA_2544 0.38 -0.7
405,620 - 10912 mRNA_2544 0.59 -1.0
405,625 + 10912 mRNA_2544 0.59 0.1
405,745 + 10912 mRNA_2544 0.68 -0.5
405,858 - 10912 mRNA_2544 0.76 0.2
405,900 + 10912 mRNA_2544 0.79 0.4
405,972 + 10912 mRNA_2544 0.85 -0.0
405,973 - 10912 mRNA_2544 0.85 0.6
405,985 - 10912 mRNA_2544 0.86 0.6
406,001 - 10912 mRNA_2544 0.87 0.4
406,026 - 10912 mRNA_2544 0.89 0.8
406,042 - 10912 mRNA_2544 0.90 -1.0
406,054 + 0.6
406,144 + -1.4
406,179 + -0.1
406,185 - -0.5
406,187 + -0.9
406,324 - -0.2
406,334 + 0.5
406,335 - -1.4
406,336 + 0.7
406,336 - 0.1
406,338 + -0.2
406,342 + 0.0
406,346 - -0.3
406,347 + -1.0
406,347 + -0.2
406,492 - 0.2
406,522 + -0.1
406,944 + -0.3
407,104 - -0.0