Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2488

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2488: 10856 - KOG1804 RNA helicase, at 267770 to 269827 10856 mRNA_2489: 10857 - HMMPfam-Surfeit locus protein 5 subunit 22 of Mediator complex-PF06179, at 270221 to 270948 10857

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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266,850 - 1.0
267,068 - 1.1
267,476 - -1.0
267,563 + 0.9
267,860 - -0.2
267,971 - 1.6
268,107 + 10856 mRNA_2488 0.16 -0.8
268,244 - 10856 mRNA_2488 0.23 0.3
268,515 - 10856 mRNA_2488 0.36 -0.0
268,562 + 10856 mRNA_2488 0.38 -0.8
268,568 - 10856 mRNA_2488 0.39 1.1
268,869 - 10856 mRNA_2488 0.53 2.0
268,969 - 10856 mRNA_2488 0.58 1.1
268,997 - 10856 mRNA_2488 0.60 0.2
269,100 + 10856 mRNA_2488 0.65 1.0
269,225 - 10856 mRNA_2488 0.71 0.1
269,389 + 10856 mRNA_2488 0.79 0.1
269,405 - 10856 mRNA_2488 0.79 -0.6
269,485 + 10856 mRNA_2488 0.83 0.3
269,537 - 10856 mRNA_2488 0.86 0.8
269,823 + -0.5
269,829 - -0.3
269,833 + -0.1
269,888 + -0.6
270,107 - -1.6
270,182 + 0.8