Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2463

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2462: 10830 - SUPERFAMILY--SSF52047, at 198885 to 199828 10830 mRNA_2463: 10831 - Hypothetical Protein, at 200051 to 202030 10831 mRNA_2464: 10832 - Hypothetical Protein, at 202806 to 204474 10832

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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199,095 + 10830 mRNA_2462 0.22 -2.2
199,105 - 10830 mRNA_2462 0.23 -0.0
199,540 - 10830 mRNA_2462 0.69 -0.3
199,847 - 0.1
199,858 + 0.5
200,319 + 10831 mRNA_2463 0.14 -1.2
200,363 - 10831 mRNA_2463 0.16 0.3
200,441 - 10831 mRNA_2463 0.20 0.1
200,477 + 10831 mRNA_2463 0.22 0.1
200,553 - 10831 mRNA_2463 0.25 -1.3
201,059 - 10831 mRNA_2463 0.51 0.2
201,612 - 10831 mRNA_2463 0.79 -0.4
201,635 + 10831 mRNA_2463 0.80 -0.7
201,639 + 10831 mRNA_2463 0.80 1.5
201,681 + 10831 mRNA_2463 0.82 0.2
201,795 - 10831 mRNA_2463 0.88 0.2
201,803 - 10831 mRNA_2463 0.88 -0.2
201,958 + 2.4
202,094 + -1.3
202,109 + 0.4
202,117 - 0.4
202,127 - -0.6
202,215 - -0.4
202,218 + -0.1
202,244 - 1.7
202,252 - -0.2
202,255 + 0.1
202,256 - -0.1
202,264 + -0.4
202,266 - -0.9
202,270 - 0.2
202,270 + -0.3
202,279 + -0.3
202,279 - -0.5
202,279 - 0.5
202,282 - -0.3
202,288 + -0.3
202,288 + 1.3
202,328 + 0.4
202,329 - 1.1
202,362 - 0.7
202,376 - -0.1
202,376 - 1.3
202,378 + 0.3
202,378 - -0.3
202,380 - 0.9
202,424 + 0.6
202,427 + 0.5
202,432 - 0.2
202,434 + -0.7
202,439 + -0.5
202,442 - -0.3
202,442 + 0.2
202,444 + 0.4
202,447 + 0.9
202,449 + -2.2
202,450 - 0.4
202,452 + 1.0
202,452 + -0.9
202,458 + 0.8
202,461 - 0.1
202,462 + -0.7
202,465 + -0.4
202,465 - -0.3
202,474 + 0.0
202,476 + 0.6
202,488 + -0.1
202,489 + 0.2
202,491 + -0.3
202,493 + -0.2
202,499 - 0.1
202,501 - 0.6
202,502 + 0.1
202,507 - 1.1
202,520 + -0.5
202,524 + 0.0
202,524 + 0.1
202,525 - 0.9
202,535 - -1.2
202,544 + 2.2
202,546 - 0.5
202,552 - -0.6
202,562 + 0.4
202,580 - -0.4
202,594 + 1.3
202,597 - 0.1
202,625 - 0.6
202,680 - -0.5
202,683 + 1.5
202,695 + -0.5
202,705 - -0.2
202,716 - 0.7
202,730 + 0.0
202,733 - -0.1
202,744 - -0.3
202,769 + 0.6