Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2346

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2345: 10713 - KOG1399 Flavin-containing monooxygenase, at 672144 to 674998 10713 mRNA_2346: 10714 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 675723 to 677238 10714 mRNA_2347: 10715 - K09207 KLF6_7 krueppel-like factor 6/7, at 677617 to 679955 10715

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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675,136 + -0.6
675,291 + -0.7
675,617 - 0.4
676,320 + 10714 mRNA_2346 0.39 0.3
676,724 - 10714 mRNA_2346 0.66 0.3
676,836 - 10714 mRNA_2346 0.73 -0.3
676,851 + 10714 mRNA_2346 0.74 1.1
677,005 - 10714 mRNA_2346 0.85 -1.1
677,034 - 10714 mRNA_2346 0.86 0.2
677,034 - 10714 mRNA_2346 0.86 0.9
677,312 - 0.3
677,322 - -0.2
677,333 + 0.2
677,341 + 2.3
677,365 + -0.4
677,485 - 0.4
677,499 - 0.2
677,655 - 0.8
677,830 + -0.7