Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2295

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2294: 10662 - KOG4131 Ngg1-interacting factor 3 protein NIF3L1, at 547521 to 548816 10662 mRNA_2295: 10663 - BLAST CsbD-like [Xanthophyllomyces dendrorhous], at 548940 to 549587 10663 mRNA_2296: 10664 - K05289 GAA1 glycosylphosphatidylinositol transamidase, at 549665 to 551990 10664

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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548,063 + 10662 mRNA_2294 0.42 0.0
548,318 - 10662 mRNA_2294 0.61 0.3
548,935 + -0.4
549,313 + 10663 mRNA_2295 0.58 -0.3
549,323 + 10663 mRNA_2295 0.59 0.6
549,325 - 10663 mRNA_2295 0.59 -0.4
549,335 + 10663 mRNA_2295 0.61 -0.6
549,335 - 10663 mRNA_2295 0.61 -0.5
549,338 + 10663 mRNA_2295 0.61 -1.3
549,454 - 10663 mRNA_2295 0.79 -0.2
549,488 + 10663 mRNA_2295 0.85 -0.6
549,505 - 10663 mRNA_2295 0.87 -2.0
549,635 - -0.7