Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2275

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2274: 10642 - KOG2352 Predicted spermine/spermidine synthase, at 499245 to 500264 10642 mRNA_2275: 10643 - HMMPfam-MAPEG family-PF01124,SUPERFAMILY--SSF161084, at 500597 to 501422 10643 mRNA_2276: 10644 - K02954 RP-S14, MRPS14, rpsN small subunit ribosomal protein S14, at 501721 to 502247 10644

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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499,608 - 10642 mRNA_2274 0.36 0.5
499,615 + 10642 mRNA_2274 0.36 1.1
499,625 - 10642 mRNA_2274 0.37 -0.6
499,912 + 10642 mRNA_2274 0.65 -0.2
500,061 - 10642 mRNA_2274 0.80 0.1
500,071 - 10642 mRNA_2274 0.81 -0.1
500,248 + -0.5
500,361 - 0.3
500,397 + 0.1
500,398 + 0.1
500,401 + 0.5
500,434 + -0.3
500,522 - -0.7
500,532 + 0.2
500,537 + -0.0
500,540 + -0.8
500,556 - -0.8
500,663 + 0.4
500,668 + 0.7
500,688 - 10643 mRNA_2275 0.11 -0.4
500,835 - 10643 mRNA_2275 0.29 0.1
500,986 - 10643 mRNA_2275 0.47 -0.0
501,124 + 10643 mRNA_2275 0.64 -0.2
501,377 + 0.2
502,297 - 0.9
502,300 + 1.0
502,301 + 0.9
502,310 + 0.4
502,311 - -0.9
502,416 + 0.2
502,422 + -1.5