Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2183

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282735 to 284065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284423 to 286019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286236 to 287917 10552

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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284,083 + -0.1
284,121 - 0.4
284,124 + -0.4
284,251 + -0.2
284,973 - 10551 mRNA_2183 0.34 -0.0
284,978 - 10551 mRNA_2183 0.35 -1.8
285,205 - 10551 mRNA_2183 0.49 -0.4
285,280 + 10551 mRNA_2183 0.54 0.2
285,570 - 10551 mRNA_2183 0.72 -0.7
285,619 - 10551 mRNA_2183 0.75 0.4
285,688 - 10551 mRNA_2183 0.79 -0.4
285,833 + 10551 mRNA_2183 0.88 1.7
285,853 - 10551 mRNA_2183 0.90 0.3
286,012 + 0.6
286,124 - 0.0
286,134 - 0.5
286,135 - 0.6
286,171 - -1.7
286,189 - 0.2
286,206 - 0.0
286,249 + -0.2
286,272 + -0.1
286,373 - 0.3
286,405 + 10552 mRNA_2184 0.10 -0.5
286,697 + 10552 mRNA_2184 0.27 -0.3
286,724 - 10552 mRNA_2184 0.29 -1.3