Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2126

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2125: 10493 - BLAST BA75_02480T0 [Komagataella pastoris], at 129988 to 130716 10493 mRNA_2126: 10494 - Hypothetical Protein, at 130943 to 133180 10494 mRNA_2127: 10495 - BLAST putative lipase ATG15 [Grifola frondosa], at 133530 to 135409 10495

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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130,067 - 10493 mRNA_2125 0.11 -0.3
130,067 - 10493 mRNA_2125 0.11 0.5
130,114 + 10493 mRNA_2125 0.17 0.5
130,133 + 10493 mRNA_2125 0.20 0.4
130,209 - 10493 mRNA_2125 0.30 -0.5
130,325 + 10493 mRNA_2125 0.46 1.0
130,366 - 10493 mRNA_2125 0.52 0.3
130,486 - 10493 mRNA_2125 0.68 0.2
130,655 + -0.0
130,813 + -0.7
130,824 + 0.4
130,831 - -0.2
130,835 + 0.1
130,950 - 0.0
131,123 + -0.9
131,469 + 10494 mRNA_2126 0.24 -0.7
131,590 + 10494 mRNA_2126 0.29 0.4
131,653 - 10494 mRNA_2126 0.32 -0.7
132,136 - 10494 mRNA_2126 0.53 1.4
132,535 - 10494 mRNA_2126 0.71 0.8
132,853 + 10494 mRNA_2126 0.85 0.9
133,104 + -0.8
133,114 - -0.3
133,286 + 0.8
133,451 - 0.1
133,453 + 0.4
133,735 + 10495 mRNA_2127 0.11 0.5
133,743 + 10495 mRNA_2127 0.11 -0.3
133,847 + 10495 mRNA_2127 0.17 -0.4
133,883 - 10495 mRNA_2127 0.19 -1.0