Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2121

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2120: 10488 - Hypothetical Protein, at 119780 to 121101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121585 to 123428 10489

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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120,636 - 10488 mRNA_2120 0.65 -0.2
120,766 + 10488 mRNA_2120 0.75 0.2
120,781 - 10488 mRNA_2120 0.76 -0.3
120,785 - 10488 mRNA_2120 0.76 0.5
120,786 + 10488 mRNA_2120 0.76 0.4
120,790 + 10488 mRNA_2120 0.76 0.3
120,795 - 10488 mRNA_2120 0.77 0.9
120,798 - 10488 mRNA_2120 0.77 -0.1
120,798 + 10488 mRNA_2120 0.77 -0.2
120,799 - 10488 mRNA_2120 0.77 -0.5
120,799 - 10488 mRNA_2120 0.77 1.1
120,803 + 10488 mRNA_2120 0.77 -0.2
120,805 - 10488 mRNA_2120 0.78 -0.1
120,806 + 10488 mRNA_2120 0.78 0.3
120,807 - 10488 mRNA_2120 0.78 0.2
120,808 + 10488 mRNA_2120 0.78 2.6
120,810 + 10488 mRNA_2120 0.78 1.3
121,088 + 0.2
121,091 + 0.3
121,202 + 1.1
121,231 - -1.4
121,238 + 0.5
121,263 + 1.2
121,354 + -1.1
121,555 - -2.1
121,676 + 0.5
121,686 + 0.3
121,708 - -0.9
121,714 - -0.5
121,835 - 10489 mRNA_2121 0.14 -0.0
121,982 + 10489 mRNA_2121 0.22 0.1
122,132 - 10489 mRNA_2121 0.30 1.0
122,136 - 10489 mRNA_2121 0.30 1.5
122,139 - 10489 mRNA_2121 0.30 0.4
122,316 + 10489 mRNA_2121 0.40 -0.4
123,150 + 10489 mRNA_2121 0.85 -0.5
123,150 + 10489 mRNA_2121 0.85 0.2
123,300 + -2.1
123,314 - 0.2
123,321 + 0.0
123,328 - -0.1
123,328 - 0.3
123,334 - 0.4
123,457 + -0.4
123,468 - 0.4
123,475 + 1.1
123,477 - -1.4
123,484 + 0.2
123,485 - -0.1
123,486 - -1.8
123,490 - -0.8
123,491 + -1.2
123,493 + 0.1
123,502 - 0.3
123,507 + -0.6
123,522 - -1.0
123,528 - -0.5
123,540 + -0.2
123,540 - -0.3
123,682 - 0.2
123,717 - -0.2
124,108 + 0.7
124,117 - 1.3
124,255 + -1.5
124,265 + -1.1
124,279 - 0.8
124,381 + 0.5
124,390 + -0.5
124,393 - -0.6
124,414 + 0.1
124,417 - -0.9
124,419 + -0.2
124,421 + -0.2
124,422 + 0.4
124,423 + -0.1