Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2094

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2093: 10461 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 54504 to 56604 10461 mRNA_2094: 10462 - Hypothetical Protein, at 56857 to 57476 10462 mRNA_2095: 10463 - Hypothetical Protein, at 57763 to 59527 10463

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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55,875 + 10461 mRNA_2093 0.65 0.9
55,993 + 10461 mRNA_2093 0.71 -1.7
56,032 + 10461 mRNA_2093 0.73 0.1
56,183 + 10461 mRNA_2093 0.80 1.7
56,293 + 10461 mRNA_2093 0.85 0.9
56,333 - 10461 mRNA_2093 0.87 -0.2
56,456 - 0.4
56,484 - 0.7
56,568 - 0.3
56,622 + -1.8
56,735 - 1.3
56,757 - 0.6
56,758 + 0.7
56,760 + 0.7
56,764 - 1.1
56,766 - -0.1
56,776 + -1.0
56,776 - -0.7
56,786 - 0.6
56,803 + 0.6
56,926 + 10462 mRNA_2094 0.11 -0.7
56,933 - 10462 mRNA_2094 0.12 -0.5
57,058 - 10462 mRNA_2094 0.32 0.1
57,062 - 10462 mRNA_2094 0.33 1.1
57,200 - 10462 mRNA_2094 0.55 -0.1
57,614 + -0.2
57,627 - -0.4
57,961 - 10463 mRNA_2095 0.11 0.2
58,281 + 10463 mRNA_2095 0.29 0.4
58,396 - 10463 mRNA_2095 0.36 -0.9