Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2068

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435 mRNA_2068: 10436 - Hypothetical Protein, at 869923 to 870194 10436

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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868,932 - 0.0
868,957 - -0.4
868,974 + -0.1
868,980 - 0.6
868,983 - 2.0
869,027 - -0.4
869,097 + 10435 mRNA_2067 0.17 1.1
869,174 + 10435 mRNA_2067 0.27 -1.5
869,210 - 10435 mRNA_2067 0.31 -0.1
869,232 + 10435 mRNA_2067 0.34 0.5
869,239 - 10435 mRNA_2067 0.35 -0.9
869,248 - 10435 mRNA_2067 0.36 -0.9
869,360 - 10435 mRNA_2067 0.50 0.1
869,379 - 10435 mRNA_2067 0.53 -0.0
869,379 - 10435 mRNA_2067 0.53 0.1
869,385 + 10435 mRNA_2067 0.53 1.3
869,405 - 10435 mRNA_2067 0.56 0.2
869,405 - 10435 mRNA_2067 0.56 0.5
869,406 + 10435 mRNA_2067 0.56 0.8
869,493 - 10435 mRNA_2067 0.67 0.1
869,524 - 10435 mRNA_2067 0.71 -0.4
869,540 - 10435 mRNA_2067 0.73 0.0
869,591 - 10435 mRNA_2067 0.80 -0.6
869,620 - 10435 mRNA_2067 0.83 -0.7
869,624 - 10435 mRNA_2067 0.84 -0.6
869,629 - 10435 mRNA_2067 0.84 0.1
869,641 - 10435 mRNA_2067 0.86 2.1
869,651 - 10435 mRNA_2067 0.87 -0.0
869,689 - -1.0
869,714 + -0.4
869,721 - 1.4
869,758 - 0.9
869,758 + 1.0
869,771 - -0.7
869,775 - -0.5
869,795 - 0.0
869,864 - 0.3
869,866 - 0.5
869,877 - 0.6
869,881 - 0.9
869,903 - -0.1
869,904 - -1.8
869,908 - -0.3
869,923 - -0.4
869,942 - -0.4
869,943 - 0.5
869,948 - 0.3
869,964 + 10436 mRNA_2068 0.15 -0.3
869,966 - 10436 mRNA_2068 0.16 0.0
869,990 + 10436 mRNA_2068 0.25 -0.3
869,990 + 10436 mRNA_2068 0.25 -0.5
869,990 - 10436 mRNA_2068 0.25 0.1
870,004 - 10436 mRNA_2068 0.30 0.8
870,012 + 10436 mRNA_2068 0.33 0.1
870,033 - 10436 mRNA_2068 0.40 0.3
870,035 - 10436 mRNA_2068 0.41 -0.4
870,042 - 10436 mRNA_2068 0.44 0.2
870,044 + 10436 mRNA_2068 0.44 0.1
870,054 + 10436 mRNA_2068 0.48 0.7
870,056 - 10436 mRNA_2068 0.49 -0.3
870,058 - 10436 mRNA_2068 0.50 0.5
870,061 - 10436 mRNA_2068 0.51 -0.1
870,070 - 10436 mRNA_2068 0.54 1.4
870,086 - 10436 mRNA_2068 0.60 0.2
870,086 - 10436 mRNA_2068 0.60 -0.2
870,093 + 10436 mRNA_2068 0.62 -1.0
870,107 - 10436 mRNA_2068 0.68 0.0
870,112 + 10436 mRNA_2068 0.69 1.4
870,127 - 10436 mRNA_2068 0.75 0.8
870,145 - 10436 mRNA_2068 0.82 0.6
870,148 - 10436 mRNA_2068 0.83 0.2
870,158 - 10436 mRNA_2068 0.86 -0.6
870,171 + 0.7
870,172 - 0.8
870,172 - 0.1
870,172 - 0.4
870,172 - 0.4
870,173 + -0.1
870,173 + 1.7
870,176 - -1.2
870,180 - -0.0
870,192 - -1.0
870,205 - 0.6
870,210 - 0.5
870,210 - 0.7
870,210 - -0.2
870,210 - 0.1
870,210 - 0.6