Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2057

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2056: 10424 - K11667 INO80C, IES6 INO80 complex subunit C, at 848164 to 849134 10424 mRNA_2057: 10425 - KOG3010 Methyltransferase, at 849514 to 850707 10425 mRNA_2058: 10426 - KOG1128 Uncharacterized conserved protein, contains TPR repeats, at 850790 to 853642 10426

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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848,556 + 10424 mRNA_2056 0.40 0.8
848,706 + 10424 mRNA_2056 0.56 1.5
849,269 - 0.1
849,273 + -1.4
849,302 - -0.1
849,410 - -0.2
849,416 - -0.6
849,437 - -0.2
849,461 + 1.0
849,595 + -0.1
849,710 - 10425 mRNA_2057 0.16 -0.2
849,742 + 10425 mRNA_2057 0.19 0.6
849,838 + 10425 mRNA_2057 0.27 -0.2
850,336 - 10425 mRNA_2057 0.69 -1.9
850,452 - 10425 mRNA_2057 0.79 -0.0