Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2012

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2011: 10379 - KOG2533 Permease of the major facilitator superfamily, at 737348 to 740033 10379 mRNA_2012: 10380 - K00681 ggt gamma-glutamyltranspeptidase / glutathione hydrolase, at 740635 to 742993 10380 mRNA_2013: 10381 - SUPERFAMILY--SSF49899, at 743258 to 744708 10381

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
739,685 + 10379 mRNA_2011 0.87 0.4
739,920 + 0.3
739,924 - 0.6
739,978 - 0.8
740,260 - -0.1
740,261 + 0.6
740,280 - -0.0
740,430 - 0.9
740,433 + 0.4
740,439 - -0.1
740,439 + 1.0
740,443 + 0.2
740,449 + -0.3
740,449 + 0.9
740,454 + 0.1
740,459 + 1.1
740,498 - -0.5
740,504 + -0.2
740,533 + -0.9
740,540 + 2.3
740,558 + -0.5
740,559 + 0.1
740,566 - 0.0
740,569 - -0.1
740,570 - 0.1
740,570 - 1.3
740,571 + -0.7
740,582 + -0.6
740,582 + -0.2
740,612 + 1.7
740,665 + 0.1
740,730 - -0.9
741,012 + 10380 mRNA_2012 0.16 -0.8
741,304 - 10380 mRNA_2012 0.28 0.1
741,309 + 10380 mRNA_2012 0.29 0.2
741,405 - 10380 mRNA_2012 0.33 0.9
741,480 + 10380 mRNA_2012 0.36 -0.1
741,754 + 10380 mRNA_2012 0.47 -0.1
741,786 + 10380 mRNA_2012 0.49 -0.7
741,900 + 10380 mRNA_2012 0.54 2.3
742,077 - 10380 mRNA_2012 0.61 -1.5
742,310 + 10380 mRNA_2012 0.71 0.4
742,610 + 10380 mRNA_2012 0.84 1.1
742,852 - -0.1
742,960 + 0.2
743,120 + -0.2
743,382 - 0.6
743,503 - 10381 mRNA_2013 0.17 -0.0