Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2004

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2003: 10371 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 714669 to 717655 10371 mRNA_2004: 10372 - Hypothetical Protein, at 718267 to 719987 10372 mRNA_2005: 10373 - K08286 E2.7.11.- protein-serine/threonine kinase, at 720750 to 723688 10373

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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717,361 - 0.7
717,806 - -0.3
717,947 - 0.2
717,962 + -1.0
717,971 + -0.0
718,113 - 0.0
718,130 + -0.4
718,424 + -0.3
718,987 - 10372 mRNA_2004 0.42 0.0
719,232 - 10372 mRNA_2004 0.56 0.2
719,260 - 10372 mRNA_2004 0.58 -0.4
719,572 - 10372 mRNA_2004 0.76 1.3
719,574 + 10372 mRNA_2004 0.76 1.1
719,842 - -0.1
720,536 - 0.5
720,891 + -1.3